Biodiverskripsi: Biodiversity Theses Database

Latest version published by Tambora Muda Indonesia on May 23, 2022 Tambora Muda Indonesia

Biodiverskripsi seeks to increase the accessibility of local biodiversity research in Indonesia by collating ecological monitoring data inherent in student theses in a sustainable platform to ease its use in a larger scope of research. We expect this initiative to fill the knowledge gap regarding Indonesian ecological data, to assist more advanced and impactful researches such as designing a conservation area or modelling the effect of climate change on biodiversity, and further improve scientific practices in Indonesian universities.

Data Records

The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 1,330 records. 2 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

  • Event (core)
    1330
  • Occurrence 
    14624
  • Reference 
    1360

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 1,330 records in English (321 KB) - Update frequency: continually
Metadata as an EML file download in English (15 KB)
Metadata as an RTF file download in English (11 KB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Tambora Muda Indonesia. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: ca58433a-3ff8-492f-9d7b-6f6d289eb6d6.  Tambora Muda Indonesia publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Indonesian Biodiversity Information Facility.

Keywords

Samplingevent; TamboraMuda; StudentTheses; Theses; Indonesia; Samplingevent

Contacts

Who created the resource:

Sabhrina Gita Aninta
Project Coordinator
Tambora Muda Indonesia Bogor ID

Who can answer questions about the resource:

Sabhrina Gita Aninta
Project Coordinator
Tambora Muda Indonesia Bogor ID
Primadieta Sudarma
Database Manager
Tambora Muda Indonesia ID

Who filled in the metadata:

Sabhrina Gita Aninta
Project Coordinator
Tambora Muda Indonesia Bogor ID
Primadieta Sudarma
Database Manager
Tambora Muda Indonesia Bandung ID

Who else was associated with the resource:

Reviewer
Anang Setiawan Achmadi
InaBIF ID
Distributor
Ide Yunianto
UGM Yogyakarta ID
Distributor
Onrizal
USU Medan ID
Distributor
Freddy Pattiselanno
UNIPA Manokwari ID

Geographic Coverage

Indonesia

Bounding Coordinates South West [-12.211, 94.46], North East [6.261, 140.889]

Temporal Coverage

Start Date / End Date 2000-01-01 / 2017-01-01

Project Data

Student theses provide a vast untapped source of information in biodiversity, especially in Indonesia where biodiversity assessment was a popular topic for most undergraduate theses. Biodiverskripsi aims to collect biodiversity data from these unpublished student theses all over Indonesia coming from the time period of 2000-2017 to detect how researches conducted by students for their theses in Indonesia fill the knowledge gap in biodiversity set. We collected data from groups of organisms that are commonly sampled in an event for research in student theses: Embryophytes, Freshwater Invertebrates, Terrestrial Invertebrates, Vertebrates, and Marine Biota. Our volunteers have bachelor degree at minimum in field related to biodiversity and understand biodiversity data to enable biodiversity data transcription according to Darwin Core framework.

Title Biodiverskripsi: Biodiversity Theses Database
Identifier BIFA3_23
Funding This project was funded by BIFA and Tambora Muda Indonesia.
Study Area Description We collated biodiversity data from student theses from three partner universities: Universitas Sumatera Utara, Universitas Gadjah Mada, and Universitas Papua. Additional content providers came from Universitas Indonesia and Institut Pertanian Bogor who independently contribute data while doing their research in those universities.
Design Description We transcribed biodiversity data from student theses that studied biodiversity in their natural habitat so that they provide species occurrences data. Studies that are literature review or ex situ observations were not included. The biodiversity data were transcribed to sampling-event data as a core, connected to occurrence data, measurement data, and literature data as extension. Following the data quality requirement of sampling-event data, we only transcribe theses which had standardized sampling protocol and clear taxonomic information of the studied species. As the volunteers were not involved in the study itself, they provided the circumstances of transcription in each sampling-event data to ease data use. However, we suggest data user to communicate with the thesis’s supervisors provided in the literature extension for questions about specific data.

The personnel involved in the project:

Point Of Contact
Sabhrina Gita Aninta
Custodian Steward
Primadieta Sudarma
Content Provider
Dina Setyaningrum
Distributor
Maya Damayanti
Content Provider
Rahmia Nugraha
Content Provider
Muhammad Imam Fadila
Arieh Mountara
Content Provider
Amelia Nugrahaningrum
Content Provider
Basith Kuncoro Adji
Content Provider
Ratna Sari
Content Provider
Maria Ulfa
Content Provider
Triana Kamelia Loeis
Content Provider
Sugeng Purnomo
Content Provider
Andika Nurdin
Content Provider
Ahmad A. Jabbar
Content Provider
Rizka Adriana
Content Provider
Arif Rahman Hakim

Sampling Methods

We transcribed theses that were resulted from biodiversity research that were submitted to their university on the period of 2000-2017 from Universitas Sumatera Utara, Universitas Gadjah Mada, Universitas Papua, Universitas Indonesia, and Institut Pertanian Bogor.

Study Extent Data came from various biodiversity assessment studies that were conducted in various ecosystems all over Indonesia.

Method step description:

  1. The volunteers selected potential theses titles from the library catalogue, examine the theses to get data required for sampling-event data, transcribe the resulting information to Darwin Core fields for sampling-event data. The examination procedure ensured that the theses include enough information on the sampling protocol to reproduce the study and that the taxonomic information of the species sampled were clear. Studies that obtain species occurrence data from ex situ observation (zoo, captive breeding, introduced species, etc.) and literature were omitted. Information about the theses were provided in the literature extension.

Additional Metadata

This data set contains biodiversity data from various student theses; please cite the theses that become the source of the data.

Purpose The data aimed to evaluate research practices in Indonesian universities, particularly the ones related to biodiversity. We seek to understand how undergraduate student theses contribute to Indonesia's biodiversity data and help biodiversity conservation and research.
Alternative Identifiers ca58433a-3ff8-492f-9d7b-6f6d289eb6d6
http://ipt.biologi.lipi.go.id/resource?r=biodiverskripsi